ID pAGRIKOLA-CATMA5a38880 standard; circular DNA; UNK; 9617 BP. XX AC unknown; XX DE Collection number: LMBP EXPR01061 XX CC (c) BCCM/LMBP Plasmid collection (Ghent University, Belgium) XX CC Reference: Hilson et al., Genome Research 14 (2004), 2176-2189 XX FH Key Location/Qualifiers FH FT CDS 902..2110 FT /label="Tn10R" FT /note="Tn10 transposase for IS10 right" FT primer complement(6991..7009) FT /label="Agri\56" FT /note="" FT promoter 5705..6655 FT /label="CaMV\35S\promoter" FT /note="" FT rep_origin complement(1..279) FT /label="pMB1\ori" FT /note="" FT primer 6524..6543 FT /label="Agri\51" FT /note="" FT terminator complement(3870..4129) FT /label="nos\terminator" FT /note="" FT misc_feature 3826..3850 FT /label="LB" FT /note="left flanking T-DNA border" FT rep_origin 3263..3810 FT /label="pSa\ori" FT /note="" FT intron 7014..7782 FT /label="PDK\intron" FT /note="intron of the Flaveria trinervia PDK gene encoding FT pyruvate orthophosphate dikinase" FT promoter complement(4716..4999) FT /label="nos\promoter" FT /note="" FT CDS complement(4144..4695) FT /label="basta\herbicide\resistance" FT /note="bar gene confers resistance to herbicide Basta" FT CDS complement(2158..2973) FT /label="Tn903\neomycin\resistance" FT /note="nptI gene confers resistance to kanamycin and FT neomycin" FT primer 7811..7830 FT /label="Agri\64" FT /note="" FT primer complement(8374..8393) FT /label="Agri\69" FT /note="" FT misc_feature 9562..9587 FT /label="RB" FT /note="right flanking T-DNA border" FT terminator 8366..9073 FT /label="ocs\terminator" FT /note="" FT intron complement(7825..8006) FT /label="CAT1\intron" FT /note="intron of the Ricinus communis (castor bean) CAT1 FT gene encoding catalase" FT attenuator 8030..8054 FT /label="attB2" FT /note="" FT attenuator complement(8333..8357) FT /label="attB1" FT /note="" FT attenuator 6660..6684 FT /label="attB1" FT /note="" FT attenuator complement(6963..6987) FT /label="attB2" FT /note="" FT promoter 5189..5205 FT /label="T7\promoter" FT /note="" FT promoter complement(9116..9132) FT /label="SP6\promoter" FT /note="" FT promoter complement(9253..9336) FT /label="lac\promoter" FT /note="" FT primer 6687..6703 FT /label="5' gene specific primer" FT CDS 6704..6944 FT /label="CATMA5a38880" FT primer complement(6945..6961) FT /label="3' gene specific primer" FT primer complement(8056..8072) FT /label="3' gene specific primer" FT CDS 8073..8313 FT /label="CATMA5a38880" FT primer complement(8314..8330) FT /label="5' gene specific primer" XX SQ Sequence 9617 BP; 2792 A; 2227 C; 2130 G; 2468 T; 0 other; catgtgagca aaaggccagc aaaaggccag gaaccgtaaa aaggccgcgt tgctggcgtt 60 tttccatagg ctccgccccc ctgacgagca tcacaaaaat cgacgctcaa gtcagaggtg 120 gcgaaacccg acaggactat aaagatacca ggcgtttccc cctggaagct ccctcgtgcg 180 ctctcctgtt ccgaccctgc cgcttaccgg atacctgtcc gcctttctcc cttcgggaag 240 cgtggcgctt tctcatagct cacgctgtag gtatctcagt tcggtgtagg tcgttcgctc 300 caagctgggc tgtgtgcacg aaccccccgt tcagcccgac cgctgcgcct tatccggtaa 360 ctatcgtctt gagtccaacc cggtaagaca cgacttatcg ccactggcag cagccactgg 420 taacaggatt agcagagcga ggtatgtagg cggtgctaca gagttcttga agtggtggcc 480 taactacggc tacactagaa gaacagtatt tggtatctgc gctctgctga agccagttac 540 cttcggaaga agagttggta gctcttgatc cggcaaacaa accaccgctg gtagcggtgg 600 tttttttgtt tgcaagcagc agattacgcg cagaaaaaaa ggatctcaag aagatccttt 660 gatcttttct acggggtctg acgctcagtg gaacgaaaac tcacgttaag ggattttggt 720 catgagatta tcaaaaagga tcttcaccta gatcctttta aattaaaaat gaagttttaa 780 atcaatctaa agtactgatg aatcccctaa tgatttttat caaaatcatt aagttaaggt 840 agatacacat cttgtcatat gatcaaatgg tttcgccaaa aatcaataat cagacaacaa 900 aatgtgcgaa ctcgatattt tacacgactc tctttaccaa ttctgccccg aattacactt 960 aaaacgactc aacagcttaa cgttggcttg ccacgcctta cttgactgta aaactctcac 1020 tcttaccgaa cttggccgta acctgccaac caaagcgaga acaaaacata acatcaaacg 1080 aatcgaccga ttgttaggta atcgtcacct ccacaaagag cgactcgctg tataccgttg 1140 gcatgctagc tttatctgtt cgggcaatac gatgcccatt gtacttgttg actggtctga 1200 tatccgtgag caaaaacggc ttatggtatt gcgagcttca gtcgcactac acggtcgttc 1260 tgttactctt tatgagaaag cgttcccgct ttcagagcaa tgttcaaaga aagctcatga 1320 ccaatttcta gccgaccttg cgagcattct accgagtaac accacaccgc tcattgtcag 1380 tgatgctggc tttaaagtgc catggtataa atccgttgag aagctgggtt ggtactggtt 1440 aagtcgagta agaggaaaag tacaatatgc agacctagga gcggaaaact ggaaacctat 1500 cagcaactta catgatatgt catctagtca ctcaaagact ttaggctata agaggctgac 1560 taaaagcaat ccaatctcat gccaaattct attgtataaa tctcgctcta aaggccgaaa 1620 aaatcagcgc tcgacacgga ctcattgtca ccacccgtca cctaaaatct actcagcgtc 1680 ggcaaaggag ccatggattc tagcaactaa cttacctgtt gaaattcgaa cacccaaaca 1740 acttgttaat atctattcga agcgaatgca gattgaagaa accttccgag acttgaaaag 1800 tcctgcctac ggactaggct tacgccatag ccgaacgagc agctcagagc gttttgatat 1860 catgctgcta atcgccctga tgcttcaact aacatgttgg cttgcgggcg ttcatgctca 1920 gaaacaaggt tgggacaagc acttccaggc taacacagtc agaaatcgaa acgtactctc 1980 aacagttcgc ttaggcatgg aagttttgcg gcattctggc tacacaataa caagggaaga 2040 cttactcgtg gctgcaaccc tactagctca aaatttattc acacatggtt acgctttggg 2100 gaaattatga ggggatctct cagtctaaag tatatatgtg taacattggt ctagtgatta 2160 gaaaaactca tcgagcatca aatgaaactg caatttattc atatcaggat tatcaatacc 2220 atatttttga aaaagccgtt tctgtaatga aggagaaaac tcaccgaggc agttccatag 2280 gatggcaaga tcctggtatc ggtctgcgat tccgactcgt ccaacatcaa tacaacctat 2340 taatttcccc tcgtcaaaaa taaggttatc aagtgagaaa tcaccatgag tgacgactga 2400 atccggtgag aatggcaaaa gtttatgcat ttctttccag acttgttcaa caggccagcc 2460 attacgctcg tcatcaaaat cactcgcatc aaccaaaccg ttattcattc gtgattgcgc 2520 ctgagcgaga cgaaatacgc gatcgctgtt aaaaggacaa ttacaaacag gaatcgaatg 2580 caaccggcgc aggaacactg ccagcgcatc aacaatattt tcacctgaat caggatattc 2640 ttctaatacc tggaatgctg ttttccctgg gatcgcagtg gtgagtaacc atgcatcatc 2700 aggagtacgg ataaaatgct tgatggtcgg aagaggcata aattccgtca gccagtttag 2760 tctgaccatc tcatctgtaa catcattggc aacgctacct ttgccatgtt tcagaaacaa 2820 ctctggcgca tcgggcttcc catacaatcg gtagattgtc gcacctgatt gcccgacatt 2880 atcgcgagcc catttatacc catataaatc agcatccatg ttggaattta atcgcggcct 2940 tgagcaagac gtttcccgtt gaatatggct cataacaccc cttgtattac tgtttatgta 3000 agcagacagt tttattgttc atgatgatat atttttatct tgtgcaatgt aacatcagag 3060 attttgagac acaacgtggc tttgttgaat aaatcgaact tttgctgagt tgaaggatca 3120 gatcacgcat cttcccgaca acgcagaccg ttccgtggca aagcaaaagt tcaaaatcac 3180 caactggtcc acctacaaca aagctctcat caaccgtggc tccctcactt tctggctgga 3240 tgatggggcg attcaggcga tccccatcca acagcccgcc gtcgagcggg cttttttatc 3300 cccggaagcc tgtggataga gggtagttat ccacgtgaaa ccgctaatgc cccgcaaagc 3360 cttgattcac ggggctttcc ggcccgctcc aaaaactatc cacgtgaaat cgctaatcag 3420 ggtacgtgaa atcgctaatc ggagtacgtg aaatcgctaa taaggtcacg tgaaatcgct 3480 aatcaaaaag gcacgtgaga acgctaatag ccctttcaga tcaacagctt gcaaacaccc 3540 ctcgctccgg caagtagtaa cagcaagtag tatgttcaat tagcttttca attatgaata 3600 tatatatcaa ttattggtcg cccttggctt gtggacaatg cgctacgcgc accggctccg 3660 cccgtggaca accgcaagcg gttgcccacc gtcgagcgcc tttgcccaca acccggcggc 3720 cggccgcaac agatcgtttt ataaattttt ttttttgaaa aagaaaaagc ccgaaaggcg 3780 gcaacctctc gggcttctgg atttccgatc cccggaatta gatcttggca ggatatattg 3840 tggtgtaacg ttatcagctt gcatgccggt cgatctagta acatagatga caccgcgcgc 3900 gataatttat cctagtttgc gcgctatatt ttgttttcta tcgcgtatta aatgtataat 3960 tgcgggactc taatcataaa aacccatctc ataaataacg tcatgcatta catgttaatt 4020 attacatgct taacgtaatt caacagaaat tatatgataa tcatcgcaag accggcaaca 4080 ggattcaatc ttaagaaact ttattgccaa atgtttgaac gatctgcttg actctagggg 4140 tcatcagatt tcggtgacgg gcaggaccgg acggggcggc accggcaggc tgaagtccag 4200 ctgccagaaa cccacgtcat gccagttccc gtgcttgaag ccggccgccc gcagcatgcc 4260 gcggggggca tatccgagcg cctcgtgcat gcgcacgctc gggtcgttgg gcagcccgat 4320 gacagcgacc acgctcttga agccctgtgc ctccagggac ttcagcaggt gggtgtagag 4380 cgtggagccc agtcccgtcc gctggtggcg gggggagacg tacacggtcg actcggccgt 4440 ccagtcgtag gcgttgcgtg ccttccaggg acccgcgtag gcgatgccgg cgacctcgcc 4500 gtccacctcg gcgacgagcc agggatagcg ctcccgcaga cggacgaggt cgtccgtcca 4560 ctcctgcggt tcctgcggct cggtacggaa gttgaccgtg cttgtctcga tgtagtggtt 4620 gacgatggtg cagaccgccg gcatgtccgc ctcggtggca cggcggatgt cggccgggcg 4680 tcgttctggg ctcatggtag atcccctcga tcgagttgag agtgaatatg agactctaat 4740 tggataccga ggggaattta tggaacgtca gtggagcatt tttgacaaga aatatttgct 4800 agctgatagt gaccttaggc gacttttgaa cgcgcaataa tggtttctga cgtatgtgct 4860 tagctcatta aactccagaa acccgcggct cagtggctcc ttcaacgttg cggttctgtc 4920 agttccaaac gtaaaacggc ttgtcccgcg tcatcggcgg gggtcataac gtgactccct 4980 taattctccg ctcatgatcg ataacattaa cgcttacaat ttccattcgc cattcaggct 5040 gcgcaactgt tgggaagggc gatcggtgcg ggcctcttcg ctattacgcc agctggcgaa 5100 agggggatgt gctgcaaggc gattaagttg ggtaacgcca gggttttccc agtcacgacg 5160 ttgtaaaacg acggccagtg agcgcgcgta atacgactca ctatagggcg aattgggtac 5220 cgggcccccc ctcgaggtcg acggtatcga taagcttgat atcgaattcc tgcagcccgg 5280 gggatccact agttctagag cggccgctcg acgaattaat tccaatccca caaaaatctg 5340 agcttaacag cacagttgct cctctcagag cagaatcggg tattcaacac cctcatatca 5400 actactacgt tgtgtataac ggtccacatg ccggtatata cgatgactgg ggttgtacaa 5460 aggcggcaac aaacggcgtt cccggagttg cacacaagaa atttgccact attacagagg 5520 caagagcagc agctgacgcg tacacaacaa gtcagcaaac agacaggttg aacttcatcc 5580 ccaaaggaga agctcaactc aagcccaaga gctttgctaa ggccctaaca agcccaccaa 5640 agcaaaaagc ccactggctc acgctaggaa ccaaaaggcc cagcagtgat ccagccccaa 5700 aagagatctc ctttgccccg gagattacaa tggacgattt cctctatctt tacgatctag 5760 gaaggaagtt cgaaggtgaa ggtgacgaca ctatgttcac cactgataat gagaaggtta 5820 gcctcttcaa tttcagaaag aatgctgacc cacagatggt tagagaggcc tacgcagcag 5880 gtctcatcaa gacgatctac ccgagtaaca atctccagga gatcaaatac cttcccaaga 5940 aggttaaaga tgcagtcaaa agattcagga ctaattgcat caagaacaca gagaaagaca 6000 tatttctcaa gatcagaagt actattccag tatggacgat tcaaggcttg cttcataaac 6060 caaggcaagt aatagagatt ggagtctcta aaaaggtagt tcctactgaa tctaaggcca 6120 tgcatggagt ctaagattca aatcgaggat ctaacagaac tcgccgtgaa gactggcgaa 6180 cagttcatac agagtctttt acgactcaat gacaagaaga aaatcttcgt caacatggtg 6240 gagcacgacc ctctggtcta ccccaaaaat gtcaaagata cagtctcaga agaccaaagg 6300 gctattgaga cttttcaaca aaggataatt tcgggaaacc tcctcggatt ccattgccca 6360 gctatctgtc acttcatcga aaggacagta gaaaaggaag gtggctccta caaatgccat 6420 cattgcgata aaggaaaggc tatcattcaa gatctctctg ccgacagtgg tcccaaagat 6480 ggacccccac ccacgaggag catcgtggaa aaagaagacg ttccaaccac gtcttcaaag 6540 caagtggatt gatgtgacat ctccactgac gtaagggatg acgcacaatc ccactatcct 6600 tcgcaagacc cttcctctat ataaggaagt tcatttcatt tggagaggac acgctcgaga 6660 caagtttgta caaaaaagca ggcttccctg tgcgacgtta tctaaggtca gaacccacca 6720 aaccctggcc cgtcaccacc atctcccatt aagccaccaa ccacatgtga caagtacttc 6780 tcttgccctg agagcaacac ttgttgttgt ctctacaagt atggtaagta ctgcttcgga 6840 tggggatgtt gcccgctcga agctgctact tgctgcgatg ataactcaag ttgctgtcct 6900 catgagtacc cggtttgtga cgttaaccgc ggaacctgtt tgatactgaa ttgacgtcgc 6960 agacccagct ttcttgtaca aagtggtctc gaggaattcg gtaccccagc ttggtaagga 7020 aataattatt ttcttttttc cttttagtat aaaatagtta agtgatgtta attagtatga 7080 ttataataat atagttgtta taattgtgaa aaaataattt ataaatatat tgtttacata 7140 aacaacatag taatgtaaaa aaatatgaca agtgatgtgt aagacgaaga agataaaagt 7200 tgagagtaag tatattattt ttaatgaatt tgatcgaaca tgtaagatga tatactagca 7260 ttaatatttg ttttaatcat aatagtaatt ctagctggtt tgatgaatta aatatcaatg 7320 ataaaatact atagtaaaaa taagaataaa taaattaaaa taatattttt ttatgattaa 7380 tagtttatta tataattaaa tatctatacc attactaaat attttagttt aaaagttaat 7440 aaatattttg ttagaaattc caatctgctt gtaatttatc aataaacaaa atattaaata 7500 acaagctaaa gtaacaaata atatcaaact aatagaaaca gtaatctaat gtaacaaaac 7560 ataatctaat gctaatataa caaagcgcaa gatctatcaa ttttatatag tattattttt 7620 caatcaacat tcttattaat ttctaaataa tacttgtagt tttattaact tctaaatgga 7680 ttgactatta attaaatgaa ttagtcgaac atgaataaac aaggtaacat gatagatcat 7740 gtcattgtgt tatcattgat cttacatttg gattgattac agttgggaag ctgggttcga 7800 aatcgataag cttgcgctgc agttatcatc atcatcatag acacacgaaa taaagtaatc 7860 agattatcag ttaaagctat gtaatattta caccataacc aatcaattaa aaaatagatc 7920 agtttaaaga aagatcaaag ctcaaaaaaa taaaaagaga aaagggtcct aaccaagaaa 7980 atgaaggaga aaaactagaa atttacctgc acaagcttgg atcctctaga ccactttgta 8040 caagaaagct gggtctgcga cgtcaattca gtatcaaaca ggttccgcgg ttaacgtcac 8100 aaaccgggta ctcatgagga cagcaacttg agttatcatc gcagcaagta gcagcttcga 8160 gcgggcaaca tccccatccg aagcagtact taccatactt gtagagacaa caacaagtgt 8220 tgctctcagg gcaagagaag tacttgtcac atgtggttgg tggcttaatg ggagatggtg 8280 gtgacgggcc agggtttggt gggttctgac cttagataac gtcgcacagg gaagcctgct 8340 tttttgtaca aacttgtcta gagtcctgct ttaatgagat atgcgagacg cctatgatcg 8400 catgatattt gctttcaatt ctgttgtgca cgttgtaaaa aacctgagca tgtgtagctc 8460 agatccttac cgccggtttc ggttcattct aatgaatata tcacccgtta ctatcgtatt 8520 tttatgaata atattctccg ttcaatttac tgattgtacc ctactactta tatgtacaat 8580 attaaaatga aaacaatata ttgtgctgaa taggtttata gcgacatcta tgatagagcg 8640 ccacaataac aaacaattgc gttttattat tacaaatcca attttaaaaa aagcggcaga 8700 accggtcaaa cctaaaagac tgattacata aatcttattc aaatttcaaa agtgccccag 8760 gggctagtat ctacgacaca ccgagcggcg aactaataac gctcactgaa gggaactccg 8820 gttccccgcc ggcgcgcatg ggtgagattc cttgaagttg agtattggcc gtccgctcta 8880 ccgaaagtta cgggcaccat tcaacccggt ccagcacggc ggccgggtaa ccgacttgct 8940 gccccgagaa ttatgcagca tttttttggt gtatgtgggc cccaaatgaa gtgcaggtca 9000 aaccttgaca gtgacgacaa atcgttgggc gggtccaggg cgaattttgc gacaacatgt 9060 cgaggctcag caggacctgc aggcatgcaa gctagcttac tagtgatgca tattctatag 9120 tgtcacctaa atctgcggcc gccaccgcgg tggagctcca gcttttgttc cctttagtga 9180 gggttaattg cgcgcttggc gtaatcatgg tcatagctgt ttcctgtgtg aaattgttat 9240 ccgctcacaa ttccacacaa catacgagcc ggaagcataa agtgtaaagc ctggggtgcc 9300 taatgagtga gctaactcac attaattgcg ttgcgctcac tgcccgcttt ccagtcggga 9360 aacctgtcgt gccagctgca ttaatgaatc ggccaacgcg cggggagagg cggtttgcgt 9420 attgggcgct cttccgcttc ctcgctcact gactcgctgc gctcggtcgt tcggctgcgg 9480 cgagcggtat cagctcactc aaaggcggta atacggttat ccacagaatc aggggataac 9540 gcaggaaaga acatgaaggc cttgacagga tatattggcg ggtaaactaa gtcgctgtat 9600 gtgtttgttt gagatct 9617 //